BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E05SP1|AL428916
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1665 0.0
>3x_Contig1741
Length = 21706
Score = 1665 bits (840), Expect = 0.0
Identities = 843/844 (99%)
Strand = Plus / Plus
Query: 1 gatcatttaattcactgcctgttcatctgggtagtagaagaatgccaaggcgactagcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2262 gatcatttaattcactgcctgttcatctgggtagtagaagaatgccaaggcgactagcgc 2321
Query: 61 atacatggctagcgacatggacccttccatccaattggattcaccatcgaggatcaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2322 atacatggctagcgacatggacccttccatccaattggattcaccatcgaggatcaagta 2381
Query: 121 gttagataggaacaccgaaaccaacataataacggtctcgaatgtagagaagttcaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2382 gttagataggaacaccgaaaccaacataataacggtctcgaatgtagagaagttcaatgt 2441
Query: 181 cattggcacatcaatggcccatcccactagtaccatgaatggagttacgaaaagggcaat 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2442 cattggcacatcaatggcccatcccactagtaccatgaatggagtcacgaaaagggcaat 2501
Query: 241 ttgtagtgaggacccaatggcaacacttagggccaagtccattttgtccttcatggcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2502 ttgtagtgaggacccaatggcaacacttagggccaagtccattttgtccttcatggcaac 2561
Query: 301 gatgacacttgttacgtgctctgctgcattgccgacgattggaatcacaataagaccgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2562 gatgacacttgttacgtgctctgctgcattgccgacgattggaatcacaataagaccgat 2621
Query: 361 gaaagttttcgatagaccggtactcacgacgatgtcatcgatggtcccaacgaggaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 gaaagttttcgatagaccggtactcacgacgatgtcatcgatggtcccaacgaggaaatc 2681
Query: 421 ggcacagatggacacgagaatagtagtgattgctaagaagatcaacgaggatctcaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 ggcacagatggacacgagaatagtagtgattgctaagaagatcaacgaggatctcaaact 2741
Query: 481 cattgattctgaaatttgttcgtgttgttgatggatgttcaatacttcttcagtttcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2742 cattgattctgaaatttgttcgtgttgttgatggatgttcaatacttcttcagtttcttc 2801
Query: 541 ggtttgttcttcgaacatgacacgatgagaaccaagttggaaaatcaaaaacaatacgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 ggtttgttcttcgaacatgacacgatgagaaccaagttggaaaatcaaaaacaatacgta 2861
Query: 601 aacgaccaatagcacgatggaagtagatcttgatagtgacagaatcttatcatcaacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aacgaccaatagcacgatggaagtagatcttgatagtgacagaatcttatcatcaacaag 2921
Query: 661 atgagaagtgcccttatcgtgaggtaaagtggccttgaacgcagcaggaatcaataacga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2922 atgagaagtgcccttatcgtgaggtaaagtggccttgaacgcagcaggaatcaataacga 2981
Query: 721 tgcacttgaaatggctaacaaagaactcatcgtttgtgctgcagtctggttgaatttctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2982 tgcacttgaaatggctaacaaagaactcatcgtttgtgctgcagtctggttgaatttctg 3041
Query: 781 ctgaactctgttatatccaccgaacaagaaacagaatcccaataccaataataggttgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3042 ctgaactctgttatatccaccgaacaagaaacagaatcccaataccaataataggttgga 3101
Query: 841 caat 844
||||
Sbjct: 3102 caat 3105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6012
Number of Sequences: 1807
Number of extensions: 6012
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)